Sounds like you are loosing most of your boost.
Make sure you got all the vacuum hoses connected back up on the turbo variable vane controller and vacuum reservoir on top of the right hand fender.
The boost controller solenoid could also be bad not letting vacuum get to the turbo VV dashpot on the turbo. Just make real sure you got everything vacuum and electrical connected back up properly.
You can also bypass the vacuum solenoid for the turbo VV controller, see this thread on how to test:>
viewtopic.php?f=5&t=70602&p=757348&hilit=boost+solenoid#p757348Also and Flash said, if you still have EGR valve in place, it could be stuck open or partly open and you are loosing boost backwards through it.
If you still have the EGR valve in the circuit, you can rule it out by simply installing a simple block off plate.
See this thread for instructions on the "how to's"...>
viewtopic.php?f=5&t=76576
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