I ran the wire down the left side of the center console then under the carpet to a small hole the seat wires use. I don't think i can take a picture because the sub itself is in the way. But you can kind of see it what i'm talking about in a picture from this how to thread for power seat installation over at JeepKJ:
http://www.jeepkj.com/forums/viewtopic. ... 57&start=0
Fourth picture down, the one with the front seats removed. You can see where the seat wires come out of the floor. You may have to loosen the bolts again on the seat tracks to work the harness under. In my case the harness was just long enough to reach.