"I planned on just adding those wires, but I'll need the Apex 2.8mm terminals to use the original connectors right? Please spell it out for me?"
So I've got a hot wire all the way to the rear harness. Check. Perhaps I'm confused. I thought I needed to add a wire to the harness that goes from the 10-pin (12 for the 06) to the 4-pin fuel pump connector, as well as a ground from the 4-pin to the floor pan. I planned on just adding those wires, but I'll need the Apex 2.8mm terminals to use the original connectors right? Please spell it out for me? 
Yep, all you need are three pins, some wire and a few hours
You'll not be able to find the pins you need at your local Radio shack

If it were easy anyone could do it
AS I remember there was no direct/complete/easy plug-n-play solution found

Gasoline cables were not long enough and the pins for various signals were in different pin positions
You'll need one pin for the plug under the seat and two for the connector on the tank. For that you'll need to "improvise"

The common approach was order the gasser cable and use two of the wires with pins needed out of it, lengthen as needed to reach. Then you had extra pins/wires. So three years or so ago buyers of the cables gave their extra wires to other owners.. There were no repair cables or pins found available from Chrysler and the gasser harness was the closest thing.
Fast foward to 2011 here's what I would do now.
Look under the seat and identify the style of connector and pines used. The gender of the pins are different in each end.
Go to your local pick-n-pay salvage yard and find a Chrysleer/jeep vehicle using the same connector type. It does not have to be the same 10 pin connector, all you want are the pins and wires. I'm not sure if it was ever determined what years of chrysler cars used this connector style.
Your at the junk yard standing in oiley mud up to your ... and you've found a car with the correct style connector, get the connector with the longest length of wire possible. Make sure you get 2 or more male and female pins.
Return home and add the two missing wires to your harness. You do not have to remove the harness from the body. The new wires can be threaded through the harness before soldering the pins on.
Another solution might be to look around your jeep for unused cables and check out the ends. There's one up under the air cleaner box and I'm sure there's more. You may luck out and find the correct ones.
Seal up all connections under the jeep very good to keep all water out
