Ok, I came to the same conclusion of all u guys. the bottom port moves coolant through the engine, this gets blocked as the thermostat opens allowing for the full amount of coolant to flow through radiator. Heres the stats. The factory setup has the CAPABILITY of 10mm travel, but the spring on the bottom of the thermostat allows the bottom plate to stop at the closed position while it travels the rest of the 10mm. The design I have is o
nly about 1.5 mm short of completely closing. It is probably insignificant, but I would feel more comfortable with it functioning exactly as factory. The reason I say it is probably insignificant is the older cars never had the bottom plate on a thermostat at all. By it being a tiny bit open it does allow some coolant back into block w/o cooling, but most goes through radiator. However, I do not want to decrease cooling capabilities AT ALL for our jeeps. I have been running this first design for months now and have not had any cooling issues at all as of yet. I am also running a flex fan directly connected to crank now though too which could be MORE than enough difference to compensate for slightly less coolant flow through radiator. The fan adds an IMPRESSIVE amount of cooling to the vehicle. I know that most of the guys buying this thermostat will still be running stock fans so I want to improve my design to ensure it functions as the factory would.
Long story short I am looking at a plate or machined part that can be threaded down into or pressed into the lower section that would raise the surface 2mm to allow for a complete block-off at a open thermostat condition. It would have the side machined out to the port that leaves at the bottom.
**EDIT**
Heres my initial idea I just came up with:

I need some aluminum stock before I can finish this project.
Thanks for all your replies and keeping up with me, sorry I didn't get back to you all sooner! I just bought a new car (40k miles...new to me...lol) and have been really busy getting it up to my standards.

Here's some pics...these were at the dealership:
2007 Dodge charger 5.7L Hemi, AWD

Here's a link to the rest:
http://s176.photobucket.com/albums/w189/mkzynski/Dodge%20charger/ - Mark