One of the spots with invalid torque values is for the bolts that hold the fan mount to the engine... there are 4-5 bolts that should be torqued to 35'ish pounds, and the manual lists 110 foot-points (or so). I caught that one when the bolts started stretching - a very distinctive feeling - and fortunately before they broke in the block.
The other that may be off, though when I last checked it was correct in one place, was torque for the plugs that are removed to use the cam alignment pins.
In general, just do a common-sense check before proceeding.
THe SM has a section showing standard torque values based upon bolt size - that's a great cross-check. If the values listed in the various installation sections of the manual vary radically from the general values table, you should explore further before twisting..
Mark